:py:mod:`deeprvat.seed_gene_discovery.evaluate`
===============================================

.. py:module:: deeprvat.seed_gene_discovery.evaluate

.. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate
   :allowtitles:

Module Contents
---------------

Functions
~~~~~~~~~

.. list-table::
   :class: autosummary longtable
   :align: left

   * - :py:obj:`evaluate_ <deeprvat.seed_gene_discovery.evaluate.evaluate_>`
     - .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.evaluate_
          :summary:
   * - :py:obj:`cli <deeprvat.seed_gene_discovery.evaluate.cli>`
     - .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.cli
          :summary:
   * - :py:obj:`evaluate <deeprvat.seed_gene_discovery.evaluate.evaluate>`
     - .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.evaluate
          :summary:
   * - :py:obj:`qqplot <deeprvat.seed_gene_discovery.evaluate.qqplot>`
     - .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.qqplot
          :summary:

Data
~~~~

.. list-table::
   :class: autosummary longtable
   :align: left

   * - :py:obj:`logger <deeprvat.seed_gene_discovery.evaluate.logger>`
     - .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.logger
          :summary:

API
~~~

.. py:data:: logger
   :canonical: deeprvat.seed_gene_discovery.evaluate.logger
   :value: 'getLogger(...)'

   .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.logger

.. py:function:: evaluate_(associations: typing.Dict[str, pandas.DataFrame], alpha: float)
   :canonical: deeprvat.seed_gene_discovery.evaluate.evaluate_

   .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.evaluate_

.. py:function:: cli()
   :canonical: deeprvat.seed_gene_discovery.evaluate.cli

   .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.cli

.. py:function:: evaluate(train_associations: str, config_file: str, out_file: str)
   :canonical: deeprvat.seed_gene_discovery.evaluate.evaluate

   .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.evaluate

.. py:function:: qqplot(df)
   :canonical: deeprvat.seed_gene_discovery.evaluate.qqplot

   .. autodoc2-docstring:: deeprvat.seed_gene_discovery.evaluate.qqplot